This GDB was configured as "x86_64-linux-gnu".
For bug reporting instructions, please see:
...
Reading symbols from /home/andre/gmsh_svn...done.
(gdb) box3d.geo -3 -bin -algo front3d -optimize_netgen -smooth 5 -clscale 1.0 -rand 1.e-8 -o box_c_gmsh_svn_vvvvbig.msh
Undefined command: "box3d". Try "help".
(gdb) run box3d.geo -3 -bin -algo front3d -optimize_netgen -smooth 5 -clscale 1.0 -rand 1.e-8 -o box_c_gmsh_svn_vvvvbig.msh
Starting program: /home/andre/gmsh_svn box3d.geo -3 -bin -algo front3d -optimize_netgen -smooth 5 -clscale 1.0 -rand 1.e-8 -o box_c_gmsh_svn_vvvvbig.msh
Info : Running '/home/andre/gmsh_svn box3d.geo -3 -bin -algo front3d -optimize_netgen -smooth 5 -clscale 1.0 -rand 1.e-8 -o box_c_gmsh_svn_vvvvbig.msh' [1 node(s), max. 1 thread(s)]
Info : Started on Thu Jan 5 02:10:56 2012
Info : Reading 'box3d.geo'...
Info : Done reading 'box3d.geo'
Info : Meshing 1D...
Info : Meshing curve 1 (Line)
Info : Meshing curve 2 (Line)
Info : Meshing curve 3 (Line)
Info : Meshing curve 4 (Line)
Info : Meshing curve 5 (Line)
Info : Meshing curve 6 (Line)
Info : Meshing curve 7 (Line)
Info : Meshing curve 8 (Line)
Info : Meshing curve 9 (Line)
Info : Meshing curve 10 (Line)
Info : Meshing curve 11 (Line)
Info : Meshing curve 12 (Line)
Info : Done meshing 1D (0.01 s)
Info : Meshing 2D...
Info : Meshing surface 16 (Plane, Delaunay)
Info : Meshing surface 18 (Plane, Delaunay)
Info : Meshing surface 20 (Plane, Delaunay)
Info : Meshing surface 22 (Plane, Delaunay)
Info : Meshing surface 24 (Plane, Delaunay)
Info : Meshing surface 26 (Plane, Delaunay)
Info : Done meshing 2D (614.45 s)
Info : Meshing 3D...
Info : Meshing volume 28 (Frontal)
Info : Region 28 Face 20, 1 intersect
Info : Region 28 Face 16, 0 intersect
Info : Region 28 Face 26, 0 intersect
Info : Region 28 Face 22, 1 intersect
Info : Region 28 Face 18, 1 intersect
Info : Region 28 Face 24, 0 intersect
Info : CalcLocalH: 1984774 Points 0 Elements 3969544 Surface Elements
Info : Check subdomain 1 / 1
Info : 3969544 open elements
Info : Meshing subdomain 1 of 1
Info : Meshing subdomain 1
Info : 3969544 open elements
Info : Use internal rules
Info : 3969544 open elements
Info : Delaunay meshing
Info : number of points: 1984774
Info : blockfill local h
Info : rel filldist = 0.1
Info : blockfill local h
Info : number of points: 36356448
Info : Points: 36356448
Info : Elements: 232456791
Info : Points: 36356452
Info : Volume Elements: 232456791
Info : Volume elements in qualityclasses:
Info : 0 - 0.05: 3990345
Info : 0.05 - 0.1: 43684
Info : 0.1 - 0.15: 563984
Info : 0.15 - 0.2: 302279
Info : 0.2 - 0.25: 2621707
Info : 0.25 - 0.3: 2888946
Info : 0.3 - 0.35: 13035092
Info : 0.35 - 0.4: 4390813
Info : 0.4 - 0.45: 7709941
Info : 0.45 - 0.5: 5499547
Info : 0.5 - 0.55: 21729097
Info : 0.55 - 0.6: 27700612
Info : 0.6 - 0.65: 24520344
Info : 0.65 - 0.7: 9046535
Info : 0.7 - 0.75: 53367882
Info : 0.75 - 0.8: 16343034
Info : 0.8 - 0.85: 26693979
Info : 0.85 - 0.9: 4493082
Info : 0.9 - 0.95: 4695785
Info : 0.95 - 1: 2820103
Info : total error: 4e+16
Info : 1844 open elements
Info : Num open: 1844
Info : free: 23619, fixed: 232433172
Info : free: 23619, fixed: 232433172
Info : SwapImprove
Info : Start SwapImprove
terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc
Program received signal SIGABRT, Aborted.
0x00007ffff5734a75 in raise () from /lib/libc.so.6
(gdb)
(gdb) where
#0 0x00007ffff5734a75 in raise () from /lib/libc.so.6
#1 0x00007ffff57385c0 in abort () from /lib/libc.so.6
#2 0x00007ffff5fea8e5 in __gnu_cxx::__verbose_terminate_handler() ()
from /usr/lib/libstdc++.so.6
#3 0x00007ffff5fe8d16 in ?? () from /usr/lib/libstdc++.so.6
#4 0x00007ffff5fe8d43 in std::terminate() () from /usr/lib/libstdc++.so.6
#5 0x00007ffff5fe8e3e in __cxa_throw () from /usr/lib/libstdc++.so.6
#6 0x00007ffff5fe92cd in operator new(unsigned long) ()
from /usr/lib/libstdc++.so.6
#7 0x00007ffff5fe9389 in operator new[](unsigned long) ()
from /usr/lib/libstdc++.so.6
#8 0x0000000000fa5be4 in netgen::BaseDynamicMem::Alloc (this=0x7fffffffafc8,
s=18446744061665665224)
at /home/andre/gmsh/svn/gmsh/contrib/Netgen/libsrc/general/
#9 0x0000000000f9f03b in netgen:: ::Alloc (
this=0x7fffffffafc8, s=18446744072204065817)
at /home/andre/gmsh/svn/gmsh/contrib/Netgen/libsrc/include/../general/dynamicmem.hpp:56
#10 0x0000000000f9ef54 in DynamicMem (this=0x7fffffffafc8,
s=18446744072204065817)
at /home/andre/gmsh/svn/gmsh/contrib/Netgen/libsrc/include/../general/dynamicmem.hpp:52
#11 0x0000000000f9ed06 in MoveableArray (this=0x7fffffffafc0,
asize=-1505485799)
at /home/andre/gmsh/svn/gmsh/contrib/Netgen/libsrc/include/../general/array.hpp:426
#12 0x0000000000f9dfa9 in BASE_INDEX_2_CLOSED_HASHTABLE (this=0x7fffffffafc0,
size=-1505485799)
at /home/andre/gmsh/svn/gmsh/contrib/Netgen/libsrc/general/hashtabl.cpp:217
#13 0x0000000000fdf855 in INDEX_2_CLOSED_HASHTABLE (this=0x7fffffffafc0,
size=-1505485799)
at /home/andre/gmsh/svn/gmsh/contrib/Netgen/libsrc/include/../general/hashtabl.hpp:1169
#14 0x00000000010317e4 in netgen::MeshOptimize3d::SwapImprove (
this=0x7fffffffbcd0, mesh=..., goal=netgen::OPT_CONFORM,
working_elements=0x0)
at /home/andre/gmsh/svn/gmsh/contrib/Netgen/libsrc/meshing/improve3.cpp:639
#15 0x000000000106620d in netgen::Meshing3::Delaunay (this=0x7fffffffd090,
mesh=..., domainnr=1, mp=...)
at /home/andre/gmsh/svn/gmsh/contrib/Netgen/libsrc/meshing/delaunay.cpp:895
#16 0x0000000001076af0 in netgen::MeshVolume (mp=..., mesh3d=...)
at /home/andre/gmsh/svn/gmsh/contrib/Netgen/libsrc/meshing/meshfunc.cpp:187
#17 0x0000000000f9b4b6 in nglib::Ng_GenerateVolumeMesh (mesh=0x207b2310,
maxh=1e+22) at /home/andre/gmsh/svn/gmsh/contrib/Netgen/nglib_gmsh.cpp:215
#18 0x0000000000b33b1e in meshGRegion::operator() (this=0x7fffffffdef0,
gr=0x185e950) at /home/andre/gmsh/svn/gmsh/Mesh/meshGRegion.cpp:882
#19 0x0000000000a823d2 in std::for_each, meshGRegion> (__first=..., __last=..., __f=...)
at /usr/include/c++/4.4/bits/stl_algo.h:4200
#20 0x0000000000a7fcd8 in Mesh3D (m=0x184db40)
at /home/andre/gmsh/svn/gmsh/Mesh/Generator.cpp:533
#21 0x0000000000a80259 in GenerateMesh (m=0x184db40, ask=3)
at /home/andre/gmsh/svn/gmsh/Mesh/Generator.cpp:636
#22 0x0000000000940f60 in GModel::mesh (this=0x184db40, dimension=3)
at /home/andre/gmsh/svn/gmsh/Geo/GModel.cpp:513
#23 0x00000000007c7985 in GmshBatch ()
at /home/andre/gmsh/svn/gmsh/Common/Gmsh.cpp:170
#24 0x00000000007c6ff3 in main (argc=15, argv=0x7fffffffe288)
at /home/andre/gmsh/svn/gmsh/Common/Main.cpp:27
andre@andre-desktop:~$ gdb ./gmsh_svn
GNU gdb (GDB) 7.1-ubuntu
Copyright (C) 2010 Free Software Foundation, Inc.
License GPLv3+: GNU GPL version 3 or later
This is free software: you are free to change and redistribute it.
There is NO WARRANTY, to the extent permitted by law. Type "show copying"
and "show warranty" for details.
This GDB was configured as "x86_64-linux-gnu".
For bug reporting instructions, please see:
...
Reading symbols from /home/andre/gmsh_svn...done.
(gdb) run box3d.geo -3 -bin -optimize_netgen -smooth 5 -clscale 1.0 -rand 1.e-8 -o box_c_gmsh_svn_vvvvbig.msh
Starting program: /home/andre/gmsh_svn box3d.geo -3 -bin -optimize_netgen -smooth 5 -clscale 1.0 -rand 1.e-8 -o box_c_gmsh_svn_vvvvbig.msh
Info : Running '/home/andre/gmsh_svn box3d.geo -3 -bin -optimize_netgen -smooth 5 -clscale 1.0 -rand 1.e-8 -o box_c_gmsh_svn_vvvvbig.msh' [1 node(s), max. 1 thread(s)]
Info : Started on Mon Jan 9 18:44:03 2012
Info : Reading 'box3d.geo'...
Info : Done reading 'box3d.geo'
Info : Meshing 1D...
Info : Meshing curve 1 (Line)
Info : Meshing curve 2 (Line)
Info : Meshing curve 3 (Line)
Info : Meshing curve 4 (Line)
Info : Meshing curve 5 (Line)
Info : Meshing curve 6 (Line)
Info : Meshing curve 7 (Line)
Info : Meshing curve 8 (Line)
Info : Meshing curve 9 (Line)
Info : Meshing curve 10 (Line)
Info : Meshing curve 11 (Line)
Info : Meshing curve 12 (Line)
Info : Done meshing 1D (0.01 s)
Info : Meshing 2D...
Info : Meshing surface 16 (Plane, Delaunay)
Info : Meshing surface 18 (Plane, Delaunay)
Info : Meshing surface 20 (Plane, Delaunay)
Info : Meshing surface 22 (Plane, Delaunay)
Info : Meshing surface 24 (Plane, Delaunay)
Info : Meshing surface 26 (Plane, Delaunay)
Info : Done meshing 2D (606.28 s)
Info : Meshing 3D...
Info : Meshing volume 28 (Delaunay)
Constructing Delaunay tetrahedralization.
Delaunay seconds: 586.04
Creating surface mesh.
Perturbing vertices.
Delaunizing segments.
Constraining facets.
Segment and facet seconds: 304.07
Removing unwanted tetrahedra.
Hole seconds: 8.16
Repairing mesh.
Repair seconds: 4.63
Writing nodes.
Writing elements.
Writing subfaces.
Writing edges.
Output seconds: 7.37
Total running seconds: 911.21
Statistics:
Input points: 1984774
Input facets: 3969544
Input segments: 5954316
Input holes: 0
Input regions: 0
Mesh points: 2695849
Mesh tetrahedra: 8667265
Mesh triangles: 20030377
Mesh subfaces: 5391694
Mesh subsegments: 6000
Info : 2695849 points 6000 edges and 5391694 faces in the final mesh
Program received signal SIGBUS, Bus error.
0x00007ffff577bdf0 in ?? () from /lib/libc.so.6
(gdb) where
#0 0x00007ffff577bdf0 in ?? () from /lib/libc.so.6
#1 0x00007ffff577d58e in malloc () from /lib/libc.so.6
#2 0x00007ffff5fe926d in operator new(unsigned long) () from /usr/lib/libstdc++.so.6
#3 0x0000000000b46792 in __gnu_cxx::new_allocator >::allocate(unsigned long, void const*) ()
#4 0x0000000000b4618a in std::_List_base >::_M_get_node() ()
#5 0x0000000000b44f25 in std::list >::_M_create_node (
this=0x7fffffffd8f0, __x=@0x7ffff80001a8) at /usr/include/c++/4.4/bits/stl_list.h:461
#6 0x0000000000b43c4b in std::list >::_M_insert (
this=0x7fffffffd8f0, __position=..., __x=@0x7ffff80001a8)
at /usr/include/c++/4.4/bits/stl_list.h:1407
#7 0x0000000000b42ce4 in std::list >::push_back (
this=0x7fffffffd8f0, __x=@0x7ffff80001a8) at /usr/include/c++/4.4/bits/stl_list.h:920
#8 0x0000000000b3d015 in recur_classify (t=0x71271780, theRegion=..., faces_bound=...,
bidon=0x7b, model=0x184db40, search=...)
at /home/andre/gmsh/svn/gmsh/Mesh/meshGRegionDelaunayInsertion.cpp:356
#9 0x0000000000b3d20b in recur_classify (t=0x5f8b19c0, theRegion=..., faces_bound=...,
bidon=0x7b, model=0x184db40, search=...)
---Type to continue, or q to quit---
at /home/andre/gmsh/svn/gmsh/Mesh/meshGRegionDelaunayInsertion.cpp:386
#10 0x0000000000b3d20b in recur_classify (t=0x600cb700, theRegion=..., faces_bound=...,
bidon=0x7b, model=0x184db40, search=...)
at /home/andre/gmsh/svn/gmsh/Mesh/meshGRegionDelaunayInsertion.cpp:386
#11 0x0000000000b3d20b in recur_classify (t=0x2dddd280, theRegion=..., faces_bound=...,
bidon=0x7b, model=0x184db40, search=...)
at /home/andre/gmsh/svn/gmsh/Mesh/meshGRegionDelaunayInsertion.cpp:386
#12 0x0000000000b3d20b in recur_classify (t=0x68ad9880, theRegion=..., faces_bound=...,
bidon=0x7b, model=0x184db40, search=...)
at /home/andre/gmsh/svn/gmsh/Mesh/meshGRegionDelaunayInsertion.cpp:386
#13 0x0000000000b3d20b in recur_classify (t=0x68ad9680, theRegion=..., faces_bound=...,
bidon=0x7b, model=0x184db40, search=...)
at /home/andre/gmsh/svn/gmsh/Mesh/meshGRegionDelaunayInsertion.cpp:386
#14 0x0000000000b3d20b in recur_classify (t=0x6399c200, theRegion=..., faces_bound=...,
bidon=0x7b, model=0x184db40, search=...)